CDS

Accession Number TCMCG007C30543
gbkey CDS
Protein Id XP_009143581.1
Location join(4571569..4571669,4571750..4571868,4571948..4572877,4572960..4573352,4573434..4573524,4573595..4574723,4574804..4574883,4575027..4575111,4575199..4575290,4575366..4575434,4575527..4575563,4575647..4575729,4575858..4576277,4576444..4576480,4576594..4576651,4576727..4576866,4576959..4577024,4577107..4577221,4577297..4577335,4577409..4577524)
Gene LOC103867278
GeneID 103867278
Organism Brassica rapa

Protein

Length 1399aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009145333.3
Definition DNA glycosylase/AP lyase ROS1 isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category L
Description ,transcriptional activator
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003906        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006304        [VIEW IN EMBL-EBI]
GO:0006305        [VIEW IN EMBL-EBI]
GO:0006306        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006342        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0016799        [VIEW IN EMBL-EBI]
GO:0019104        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031935        [VIEW IN EMBL-EBI]
GO:0031936        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035510        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044728        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0045815        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0060969        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070988        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080111        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1905268        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]
GO:2001251        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATAAACAACAAGCGAGAGAAGAAACTACATGGGTTCCTCAGACACCCATCAAGCCAATTACTCCGATCTACCCAGATCAGATTCAGACAGAGGAAAGGAGATTCGCTGGGAACAAAGACAAGAGTGGTCTTGACCATTTGTCTTTTGGAGATTTGCTGGCTCTAGCCAACAATGCTTCCTCAGTGTTTTTATCTCGTCAGAATGGGATTGATAAAGAACATGTCATCAAGACTCCTGAGAAGCCAAAGAGGAAGAAGCATAGGCCAAAGGTTGTCAGAGAAGCGAAACCAAAGAGAGATATTAAACCGAAAACTCCGAAGAAGCCTGCTGCTGCTGTTGAGGGTGAAGAAAGCAAAACACCTAAGAGGAAATACGTGAGGAAGAAAAAAGAAGCTGGTGAGGATCAAGAAGAATACACGCCGGTTGAAGAATCATCAGGAGCAGCAGCAGAAGATGGAGAAGCTTCAGATCATGATGGCAAGAAGCCTTGTAGAAGAGCCTTGGAGTTTGACGATCAGAGTCTCAAACCTCAAAACGGAGAAGCACAGCACAGAGATGAGACAAAGCAGGATCAAGACTTGCAAGAGAGTCACATGGCAGCAGTGCCAAGCACGCCTAAGAGAAAGCGCAGCAGCCAAAGTAGAAGAATGGGAAAGGAAATGAAGAATAATGAGGCACAAGCCACAAAGAGGAGACAAGGCAAAGAACCAACTAGAAGTAACATATATTTTTCAGGGCAACAATACGAGCAGGTGTTTGCGGACAATGAAGCACAATGGTTGTTTTCTACAGAATGGCTTCAGAAAGGGATGAGATCTCGTTCCACAACTGGACAACAACTTGTTACACAAGAGAATGTTGCTGCCTTTGACTCAGACTGTAGAGTCCTAACCTTTCAGGGTAGGCAGAGTTTTGAGTCTAATGCTCACTTGGATAAGATAGAAACTCCAACAAAGAAGAGAACTACAGGCCACGCTCGGTTCCGGTGTTTGTCTTCCACAAATAAAGCTTCTGAGCAGTCACAAGTAGGATGGTATAGCAGACAGACGCAAGTGGCCTCAAGCAGAAAGAAACGAACCACTAAGTCTCAGACCAAACAGCTCACACTTCTCCCTAATCACTGCCACTTTCCACCTTCATTTGCTGGACTAGCTCCAGAAGCTATTTGGCAGCAACGCCACTCTATTGAAGCAATCAGCGAGCTAATGCGTCTACTAGACATCAACAGAGAATACTCAGAAACTGCTCTTGTTCCTTATGGAATGAACAGCAGTTACAGCGTAGGAAACCAGATTGTGATCTTCAACGGTGGCGCTGGAGCAATTGTGCCTTCGACTCGCGTTAAGAAGCCGCGGCGCGAGCGAGCAAAGGTTCATATAGATAATGAGACGGATAGAGTCTGGAAGCTTTTGATGGAGAGTATTGATAGCGAAGGTGTTGACGGATCAGACGAGAAGAAGGCCAAATGGTGGGAGGAAGAACGTAATGTCTTTAGAGGAAGAGCTGACTCATTCATAGCACGAATGCATCTTGTTCAAGGTGATAGACGTTTTACACCATGGAAAGGATCAGTTGTTGATTCTGTGGTTGGAGTGTTTCTCACTCAAAACGTTTCTGATCATCTCTCAAGCTCTGCGTTTATGTCACTAGCTGCGGAGTATCCAGTACCTTTTGTACCCAGCAGTGACTTTGAAGTAGGAGAAAGCTCCATGCCTTCTATCAGGATTACCTACTTGGACTCGGATGAACCGATCTCAAACCCACCAGTTCCCAGTGAGACTTCTGCTGCTTTAGACAACACACAGCCTGATGAGGAGAAGGAGTATGTAAACAGCAAGGACACCTCAAGGAGCAGTAGTGAGATCGCCAGCTCAGGGAATGAGTCAACTGTCAAAACTACAGATTCAAAGGCGCAGGTGGATTCAGACAGAACTGGCTCAAGCGTGGAAGTTAGCAAGACAGTTCTTATTGTCCAAGAGCTGTTTCCATCTGAAGATTCCGTACTCACATGTCAGAACTCGTTGGTTTCTGAAACTCCTAAGATGACAGAGAGAGCAGGATCAAGCTCTGAGATCAACTCAGAAGCAGAGAATTGTACACACTTTGTGAAGCTCCTAGAGTCTCAGGGGTCTGCTCAGCTTCAAGAGAAAGAAAGTGACGTCATCACAGCTGATACTGTCTTAGTAGAAGAGGCCAGTCAAAAGACTCAGTGTTCAAGCAGTCCTGGAAGTTTACAAATATCCCCAAACACGTCTCCTGGTGATTGTAGCTCAGAGGTTAAGGACTTCAAGTCATTGAAAGGGAAAGGAAAGTATTCTGATGATGAACCATGTTGTTTCTTTGGGGATTTCTTGAGTGTTCAGAAACCAGAGATACCTGACAGCTCCAGCAGCGTTCCTTCAACAAAGATCGTGATAGAAACTCCAATTCCAGATATTAACGAAAGCACAAACTGTCTTGATGTCCAAGAAGGCACAGAAAAACAACAACCAGGACCTGACTCATCATCCAAAAAGATCAGTCCTATGGATAAGGCTACTTTCAATGCGGATGGGAAAAAGATTTTGAAGGAGGTAGACGAGGAGTTTGATTGGGACAGTTTAAGAAGAGAAGCGGAAGGCAGAGAAGGCAAAAGAGAGAAAACAGCAAGGTCATTGGACTCTGTTGACTGGGAAGCCATAAGAACTGCTGATGTCAATGAAGTTGCTGAAACCATTAAGAGCCGTGGGATGAACCATAAACTTGCTGAACGTATACAGGGCTTCCTTAACCGACTGCTAACAGACCATGGGAGTCTTGATCTGGAATGGTTGAGAGATGTTCCACCTGACAAAGCAAAAGAGTATCTTCTGAGCTTCAATGGACTGGGACTAAAAAGCGTGGAGTGTGTTAGGCTGCTAACGCTGCACCATCTTGCCTTTCCAGTTGATACCAATGTTGGGCGCATAGCGGTTAGACTCGGATGGGTACCCCTTCAACCGCTACCAGAGTCTCTTCAACTGCATCTTCTAGAAATGTATCCCGTGCTTGAGTCTATACAGAAGTATCTTTGGCCACGCTTGTGCAAATTCGACCAAAAAACATTGTATGAATTGCATTACCAAATGATTACTTTCGGAAAGGTGTTCTGTACGAAAAGCAAACCCAACTGCAATGCTTGTCCTATGAGAGGGGAATGTAGACACTTTGCTAGTGCCTTTGCAAGTGCGAGGTTTGCATTACCTGGTCCAGAGAAAGGAATGGAGAGACCTGATGTTCCTCTACAGAGCCTACCAGAGCCATTGCGGAGACAGCAAGGGTTAGAAGTAGTCAACCACTCAGAAGCAGCAAATAGAGTCACAAGCTGTGAACCGATAATTGAAGTGCCAGCATCACCAGAGCCAGAGTGCGCAGAAGTTTCAATGGCTGATATAGAGGACGCTTTCTTTGAGGATCCTGAAGAGATTCCAACAATAAGGCTGAACATGGATGCATTCACAAACAACCTGAAGAAAATTTTTGAGCACAGCAAGGAACTGCAAGATGGAAACATGTCTGGGGCTCTGGTTGCACTTACCGCTGAGGCTGCGTCTCTTCCAATGCCTAAGCTCAAGAACATTAGCCAGCTGAGGACTGAACACCAAGTCTATGAACTTAAAGACGACCATCCTCTTCTAGCTCAGTTTGAGAAGCGAGAAACTGATGATCCATGTTCGTACTTGCTTGCTATATGGACACCAGGTGAGACGGTTGATTCCATTCAACCAACTAGAAGCAAATGCATTTGGCAAGAAGCAGGCAAAATGTGTAATGAGAAAACTTGTTTCTCGTGCAACAACATAAGGGAGACGCAATCACAAACCGTTAGAGGAACCATCTTGGTACCTTGTAGAACAGCGATGAGAGGTAGCTTCCCACTCAACGGTACATACTTCCAAGTCAACGAGGTGTTTGCGGATCACGAGTCTAGTCTAACGCCAATTGATGTTCCAAGAGACTGGTTATGGGACCTAGCTAGAAGAACTGTCTACTTTGGCACATCTATCCCATCAATCTTTAAAGGTTTATCTACTGAAACAATTCAACAATGTTTCTGGAGAGGGTATGTATGTGTGAGAGGATTTGATAGGCAGACAAGAGCACCAAGGCCTTTGATCGCGAGACTGCACTTCCCTAAAAGCAAAATGAAGTCACAGGTTAATCCGGATGATGCATAG
Protein:  
MDKQQAREETTWVPQTPIKPITPIYPDQIQTEERRFAGNKDKSGLDHLSFGDLLALANNASSVFLSRQNGIDKEHVIKTPEKPKRKKHRPKVVREAKPKRDIKPKTPKKPAAAVEGEESKTPKRKYVRKKKEAGEDQEEYTPVEESSGAAAEDGEASDHDGKKPCRRALEFDDQSLKPQNGEAQHRDETKQDQDLQESHMAAVPSTPKRKRSSQSRRMGKEMKNNEAQATKRRQGKEPTRSNIYFSGQQYEQVFADNEAQWLFSTEWLQKGMRSRSTTGQQLVTQENVAAFDSDCRVLTFQGRQSFESNAHLDKIETPTKKRTTGHARFRCLSSTNKASEQSQVGWYSRQTQVASSRKKRTTKSQTKQLTLLPNHCHFPPSFAGLAPEAIWQQRHSIEAISELMRLLDINREYSETALVPYGMNSSYSVGNQIVIFNGGAGAIVPSTRVKKPRRERAKVHIDNETDRVWKLLMESIDSEGVDGSDEKKAKWWEEERNVFRGRADSFIARMHLVQGDRRFTPWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAAEYPVPFVPSSDFEVGESSMPSIRITYLDSDEPISNPPVPSETSAALDNTQPDEEKEYVNSKDTSRSSSEIASSGNESTVKTTDSKAQVDSDRTGSSVEVSKTVLIVQELFPSEDSVLTCQNSLVSETPKMTERAGSSSEINSEAENCTHFVKLLESQGSAQLQEKESDVITADTVLVEEASQKTQCSSSPGSLQISPNTSPGDCSSEVKDFKSLKGKGKYSDDEPCCFFGDFLSVQKPEIPDSSSSVPSTKIVIETPIPDINESTNCLDVQEGTEKQQPGPDSSSKKISPMDKATFNADGKKILKEVDEEFDWDSLRREAEGREGKREKTARSLDSVDWEAIRTADVNEVAETIKSRGMNHKLAERIQGFLNRLLTDHGSLDLEWLRDVPPDKAKEYLLSFNGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEMYPVLESIQKYLWPRLCKFDQKTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFASARFALPGPEKGMERPDVPLQSLPEPLRRQQGLEVVNHSEAANRVTSCEPIIEVPASPEPECAEVSMADIEDAFFEDPEEIPTIRLNMDAFTNNLKKIFEHSKELQDGNMSGALVALTAEAASLPMPKLKNISQLRTEHQVYELKDDHPLLAQFEKRETDDPCSYLLAIWTPGETVDSIQPTRSKCIWQEAGKMCNEKTCFSCNNIRETQSQTVRGTILVPCRTAMRGSFPLNGTYFQVNEVFADHESSLTPIDVPRDWLWDLARRTVYFGTSIPSIFKGLSTETIQQCFWRGYVCVRGFDRQTRAPRPLIARLHFPKSKMKSQVNPDDA